Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015931065.1_cds_XP_016477975.1_69649
CDS Infomation	[gene=LOC107799383] [db_xref=GeneID:107799383] [protein=ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like] [protein_id=XP_016477975.1] [location=join(54993..55532,55785..56273,56591..56806,57991..58314,58517..58759,60732..60950)] [gbkey=CDS]
Sequence	ATGAGAAATCGAAGAATCCGAAGGTTAAGCTTTGCTCTCCTACTTCTCGCACTTCTCCCA ATTTCTACACTCGGACGTCAATTAGTGCTCGTCCTCTCTCAAGACGACCTCACAGAAGGA ACCGCTGATTCTACAAATCTCGGTGATGACACGTCAGATACTGGATTCGACGATTTCATC GACTCCGAAGCAAAGCCCGATTACGTGCTTGATCCGGGCTCATGGAGCCCGATTTTCGAG CCCGCTATTGCGCCTCACGATCACCTTGGAGGTGAAGCGTCGTATTATGAAACGGTGAGT AAGATAGTTAAGGCGTCAAGCAGAGGCGATGAAAGGGCGATGGAGGAGGCGGCGTCTGAG ATCGAAGCGGCTGCATCAGCTGGCCACCCCCACGCGCAGTCGATTTTAGGGTTTTTGTAC GGAATGGGAATTGGAAGAGAGAGGAATAAAGCTAAGTCTTTTCTATACCACCATTTTGCT GCTGAAGGCGGCAATATGCAATCCAAAATGGCACTTGCTTACATTTATTCTCGCCAAGAA ATGCACGATAAAGCTGTAAAGTTGTATGCTGAATTGGCAGAGGTAGCCATTAACAGTTTC CTGATATCGAAGGACTCACCTGTGATTGAACCGGTGAGGATACACAGTGGAGCAGAAGAA AATAAGGAAGCCTTGAGGAAGTCACGAGGGGAGGAAGATGAGGACTTCCAGATTTTGGAA TACCAGGCTCAAAAAGGGAACGCTGGTGCAATGTACAAAATTGGGATATTCTACTACTTT GGTTTAAGGGGAGTAAGGCGCGATCACACCAAGGCATTATCGTGGTTTCTGAAGGCAGTG GAGAAGGGTGAGGCGAGATCTATGGAACTTCTTGGGGAGATATATGCAAGAGGAGCTGGA ATTCAAAGGAACTTTACCAAGGCATTAGAGTGGCTTACTCTTGCATCCAAGCAACAACTT TTTTCTGCTTACAATGGTTTAGGCTATCTCTATGTCAAAGGATATGGAGTGGAAAAGAAC AACACTAAGGCAAAAGAGTATTTCGAGAAGGCTGCAGAAAATGCAGAGGCTGGTGGATTC TACAACCTCGGAGTCATGTATCTTAAAGGAATTGGGGTGAAGAGGGATGTGAAATTAGCA ACCAAATATCTTACAACGGCTTTTGATGCCGGTCAACCAAAAGCATTTTATCAACTGGCG AAAATGTTCCAAACTGGTGTGGGTTATAAGAAAAATGTTCCTCTGGCAACTGCCTTGTAC AAACTAGTTGCGGAACGTGGACCATGCAGTTCTTTGTCTAGATGGGCACTAGAGTCATAT TTGAAAGGAGATGTGGGCAAGGCTTTCCTTTTGTATTCGCGAATGGCAGAGTTAGGCTAT GAGATTGCGCAAAGTAATGCTGCATGGATCCTTGACAAATATGGAGAAAGAAGCATGTGT TTGGGAGAATCTGGGGTTTGCAGTGATGAAGAGAGGCATCAACGTGCGCATGCCTTGTGG TGGCAAGCTTCTGAGCAGGGTAATGAACATGCTGCATTGCTTATTGGAGACGCATATTAC TATGGTCGGGGTACTGAGCGGGACTATGAACGTGCAGCTGAGGCATATATGCACGCCAAA TCCCAATCTAATGCTCAAGCTATGTTCAATCTTGGTTATATGCATGAGCATGGCCAAGGA CTACCTTTAGATCTTCATCTTGCCAAACGCTACTACGATCAGGCACTAGAAATTGATAAT GCTGCAAAATTGCCTGTAACATTGGCCCTTGTAAGCTTGTGGATTAGGAAAAACCATGCC AATAGTTTTTTGGTTCACATAATTGATTCGTTACCAGAATTTTATCCCAAAGTGGAAGCA TGGGTGGAGGATGTCATAATGGAGGAAGGAAATGCAACAATTCTTACCCTATTTGTATGC CTTCTAACAGTGCTTTACCTTCGTGAGCGGCAGCGCAGGCATGTCGCTGCTGCTGGAGAG GTTGCTTTCCCTCATCAACTTGGTGAGCTAGGTGTGCCTGTAGCCAATTAA

Peptide Sequence

PEP ID	XP_016477975.1
PEP Infomation	PREDICTED: ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like [Nicotiana tabacum]
Sequence	MRNRRIRRLSFALLLLALLPISTLGRQLVLVLSQDDLTEGTADSTNLGDDTSDTGFDDFI DSEAKPDYVLDPGSWSPIFEPAIAPHDHLGGEASYYETVSKIVKASSRGDERAMEEAASE IEAAASAGHPHAQSILGFLYGMGIGRERNKAKSFLYHHFAAEGGNMQSKMALAYIYSRQE MHDKAVKLYAELAEVAINSFLISKDSPVIEPVRIHSGAEENKEALRKSRGEEDEDFQILE YQAQKGNAGAMYKIGIFYYFGLRGVRRDHTKALSWFLKAVEKGEARSMELLGEIYARGAG IQRNFTKALEWLTLASKQQLFSAYNGLGYLYVKGYGVEKNNTKAKEYFEKAAENAEAGGF YNLGVMYLKGIGVKRDVKLATKYLTTAFDAGQPKAFYQLAKMFQTGVGYKKNVPLATALY KLVAERGPCSSLSRWALESYLKGDVGKAFLLYSRMAELGYEIAQSNAAWILDKYGERSMC LGESGVCSDEERHQRAHALWWQASEQGNEHAALLIGDAYYYGRGTERDYERAAEAYMHAK SQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDNAAKLPVTLALVSLWIRKNHA NSFLVHIIDSLPEFYPKVEAWVEDVIMEEGNATILTLFVCLLTVLYLRERQRRHVAAAGE VAFPHQLGELGVPVAN

Transcript Sequence

Gene sequence data has not been registered.